1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_06408.1

Zci_06408.1


Description : class-I ARF-GTPase (ARFA1)


Gene families : OG_01_0000403 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_06408.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT1G10630 No alias ADP-ribosylation factor A1F 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G70490 No alias Ras-related small GTP-binding family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g13920.1 No alias ARF-GTPase 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_20740V3.1 No alias ADP-ribosylation factor A1E 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_14940V3.1 No alias ADP-ribosylation factor A1E 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_20580V3.1 No alias ADP-ribosylation factor A1E 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004615 phosphomannomutase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009226 nucleotide-sugar biosynthetic process IEP HCCA
BP GO:0009298 GDP-mannose biosynthetic process IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0017003 protein-heme linkage IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0019673 GDP-mannose metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 ion transmembrane transport IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!