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  5. Zci_06546.1

Zci_06546.1


Description : component TRM61 of TRM61-TRM6 tRNA adenosine-methyltransferase complex


Gene families : OG_01_0007030 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_06546.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT5G14600 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre05.g244236 No alias RNA processing.RNA modification.rRNA/tRNA... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEA Interproscan
BP GO:0030488 tRNA methylation IEA Interproscan
CC GO:0031515 tRNA (m1A) methyltransferase complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA
BP GO:0006352 DNA-templated transcription, initiation IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR014816 tRNA_MeTrfase_Gcd14 224 328
IPR014816 tRNA_MeTrfase_Gcd14 134 203
IPR014816 tRNA_MeTrfase_Gcd14 469 518
No external refs found!