AT2G39230

Description : LATERAL ORGAN JUNCTION

Gene families : OG_01_0011632 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G39230
Cluster	HCCA: Cluster_160

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000959	mitochondrial RNA metabolic process	IEP	HCCA
BP	GO:0016444	somatic cell DNA recombination	IEP	HCCA
BP	GO:0042991	obsolete transcription factor import into nucleus	IEP	HCCA
BP	GO:0080156	mitochondrial mRNA modification	IEP	HCCA
BP	GO:1900864	mitochondrial RNA modification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	592	637
IPR002885	Pentatricopeptide_repeat	482	531
IPR002885	Pentatricopeptide_repeat	798	844
IPR002885	Pentatricopeptide_repeat	693	742
IPR002885	Pentatricopeptide_repeat	344	392
IPR002885	Pentatricopeptide_repeat	550	577
IPR002885	Pentatricopeptide_repeat	656	685
IPR002885	Pentatricopeptide_repeat	457	480
IPR002885	Pentatricopeptide_repeat	419	440
IPR002885	Pentatricopeptide_repeat	312	341
IPR002885	Pentatricopeptide_repeat	244	269
IPR002885	Pentatricopeptide_repeat	770	796
IPR002885	Pentatricopeptide_repeat	208	234
IPR002885	Pentatricopeptide_repeat	171	199

External Links

PLAZA 3.0 Dicots	AT2G39230