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  5. Zci_07031.1

Zci_07031.1


Description : component eS1 of SSU proteome


Gene families : OG_01_0000966 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000966_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_07031.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT3G04840 No alias Ribosomal protein S3Ae 0.3 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G34670 No alias Ribosomal protein S3Ae 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g568650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g02810.1 No alias component RPS3a of SSU proteome 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_17260V3.1 No alias Ribosomal protein S3Ae 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_18590V3.1 No alias Ribosomal protein S3Ae 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_2090V3.1 No alias Ribosomal protein S3Ae 0.24 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_21510V3.1 No alias Ribosomal protein S3Ae 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_18300V3.1 No alias Ribosomal protein S3Ae 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_14160V3.1 No alias Ribosomal protein S3Ae 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005253 anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 1 185
No external refs found!