1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_07376.2

Zci_07376.2


Description : pathogen polygalacturonase inhibitor (PGIP)


Gene families : OG_01_0000116 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_07376.2
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
Zci_07336.1 No alias no annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07376.1 No alias pathogen polygalacturonase inhibitor (PGIP) 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07376.3 No alias pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07479.3 No alias no annotation 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07479.5 No alias no annotation 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07751.2 No alias pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07751.4 No alias no annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07783.1 No alias no hits & (original description: none) 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11952.1 No alias no annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_15884.1 No alias no annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007160 cell-matrix adhesion IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
BP GO:0031589 cell-substrate adhesion IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 74 113
IPR001611 Leu-rich_rpt 142 164
IPR001611 Leu-rich_rpt 165 225
IPR001611 Leu-rich_rpt 238 297
No external refs found!