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  5. AT2G40060

AT2G40060


Description : Clathrin light chain protein


Gene families : OG_01_0001833 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001833_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40060
Cluster HCCA: Cluster_140


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009504 cell plate IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000781 chromosome, telomeric region IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003958 NADPH-hemoprotein reductase activity IEP HCCA
MF GO:0004352 glutamate dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004353 glutamate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0004372 glycine hydroxymethyltransferase activity IEP HCCA
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005457 GDP-fucose transmembrane transporter activity IEP HCCA
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP HCCA
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006491 N-glycan processing IEP HCCA
BP GO:0006493 protein O-linked glycosylation IEP HCCA
BP GO:0006517 protein deglycosylation IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008142 oxysterol binding IEP HCCA
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009704 de-etiolation IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
BP GO:0009868 jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
CC GO:0009897 external side of plasma membrane IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010959 regulation of metal ion transport IEP HCCA
MF GO:0015105 arsenite transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015700 arsenite transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015783 GDP-fucose transmembrane transport IEP HCCA
BP GO:0015786 UDP-glucose transmembrane transport IEP HCCA
MF GO:0016208 AMP binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030544 Hsp70 protein binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
BP GO:0033609 oxalate metabolic process IEP HCCA
BP GO:0033611 oxalate catabolic process IEP HCCA
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP HCCA
MF GO:0036080 purine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043270 positive regulation of ion transport IEP HCCA
MF GO:0043295 glutathione binding IEP HCCA
BP GO:0043434 response to peptide hormone IEP HCCA
BP GO:0043649 dicarboxylic acid catabolic process IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
BP GO:0048358 mucilage pectin biosynthetic process IEP HCCA
BP GO:0048363 mucilage pectin metabolic process IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
MF GO:0050203 oxalate-CoA ligase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051050 positive regulation of transport IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051924 regulation of calcium ion transport IEP HCCA
BP GO:0051928 positive regulation of calcium ion transport IEP HCCA
MF GO:0052622 ATP dimethylallyltransferase activity IEP HCCA
MF GO:0052623 ADP dimethylallyltransferase activity IEP HCCA
MF GO:0052742 phosphatidylinositol kinase activity IEP HCCA
BP GO:0060416 response to growth hormone IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071219 cellular response to molecule of bacterial origin IEP HCCA
BP GO:0071323 cellular response to chitin IEP HCCA
BP GO:0071417 cellular response to organonitrogen compound IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072334 UDP-galactose transmembrane transport IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
BP GO:0080148 negative regulation of response to water deprivation IEP HCCA
BP GO:0080163 regulation of protein serine/threonine phosphatase activity IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:0080170 hydrogen peroxide transmembrane transport IEP HCCA
BP GO:0090480 purine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098754 detoxification IEP HCCA
MF GO:1900750 oligopeptide binding IEP HCCA
BP GO:1901652 response to peptide IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 53 224
PLAZA 3.0 Dicots AT2G40060