AT2G40080

Description : Protein of unknown function (DUF1313)

Gene families : OG_01_0002497 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002497_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G40080
Cluster	HCCA: Cluster_164

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009648	photoperiodism	IMP	Interproscan
BP	GO:0009648	photoperiodism	IEP	Interproscan
BP	GO:0009649	entrainment of circadian clock	IMP	Interproscan
BP	GO:0009909	regulation of flower development	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	IMP	Interproscan
BP	GO:0010114	response to red light	IMP	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0042752	regulation of circadian rhythm	None	Extended
BP	GO:0042753	positive regulation of circadian rhythm	IMP	Interproscan
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048573	photoperiodism, flowering	IMP	Interproscan
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0080167	response to karrikin	IEP	Interproscan
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000380	alternative mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0005496	steroid binding	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006333	chromatin assembly or disassembly	IEP	HCCA
BP	GO:0006406	mRNA export from nucleus	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006833	water transport	IEP	HCCA
BP	GO:0006878	cellular copper ion homeostasis	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
BP	GO:0007623	circadian rhythm	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009685	gibberellin metabolic process	IEP	HCCA
BP	GO:0009686	gibberellin biosynthetic process	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009804	coumarin metabolic process	IEP	HCCA
BP	GO:0009805	coumarin biosynthetic process	IEP	HCCA
BP	GO:0009845	seed germination	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
BP	GO:0010119	regulation of stomatal movement	IEP	HCCA
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010501	RNA secondary structure unwinding	IEP	HCCA
BP	GO:0010727	negative regulation of hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0010728	regulation of hydrogen peroxide biosynthetic process	IEP	HCCA
BP	GO:0010730	negative regulation of hydrogen peroxide biosynthetic process	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
BP	GO:0016101	diterpenoid metabolic process	IEP	HCCA
BP	GO:0016102	diterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
BP	GO:0032365	intracellular lipid transport	IEP	HCCA
BP	GO:0032392	DNA geometric change	IEP	HCCA
BP	GO:0032508	DNA duplex unwinding	IEP	HCCA
MF	GO:0032934	sterol binding	IEP	HCCA
BP	GO:0042044	fluid transport	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046487	glyoxylate metabolic process	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0048511	rhythmic process	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051302	regulation of cell division	IEP	HCCA
BP	GO:0055070	copper ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1903426	regulation of reactive oxygen species biosynthetic process	IEP	HCCA
BP	GO:1903427	negative regulation of reactive oxygen species biosynthetic process	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA
BP	GO:2000378	negative regulation of reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR009741	EARLY_FLOWERING_4_dom	21	101

External Links

PLAZA 3.0 Dicots	AT2G40080

AT2G40080

Expression Profile

Co-expression Networks

Functional Annotation