Zci_07575.1

Description : C3H zinc finger transcription factor

Gene families : OG_01_0001410 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zci_07575.1
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp1g03200.1	No alias	C3H zinc finger transcription factor	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004357	glutamate-cysteine ligase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
MF	GO:0008373	sialyltransferase activity	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	315	339
IPR004088	KH_dom_type_1	230	292

External Links

No external refs found!