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  5. Zci_07751.2

Zci_07751.2


Description : pathogen polygalacturonase inhibitor (PGIP)


Gene families : OG_01_0000116 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_07751.2
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Zci_07376.1 No alias pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07376.2 No alias pathogen polygalacturonase inhibitor (PGIP) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07479.3 No alias no annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07479.4 No alias no annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 181 203
IPR001611 Leu-rich_rpt 373 395
IPR001611 Leu-rich_rpt 425 480
IPR001611 Leu-rich_rpt 205 264
IPR001611 Leu-rich_rpt 301 360
IPR013210 LRR_N_plant-typ 116 153
No external refs found!