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Description : RING/U-box superfamily protein
Gene families : OG_01_0004217 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004217_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G40640 | |
| Cluster | HCCA: Cluster_164 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005739 | mitochondrion | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000009 | alpha-1,6-mannosyltransferase activity | IEP | HCCA |
| MF | GO:0000030 | mannosyltransferase activity | IEP | HCCA |
| BP | GO:0000212 | meiotic spindle organization | IEP | HCCA |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006360 | transcription by RNA polymerase I | IEP | HCCA |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | HCCA |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | HCCA |
| BP | GO:0006555 | methionine metabolic process | IEP | HCCA |
| BP | GO:0007140 | male meiotic nuclear division | IEP | HCCA |
| BP | GO:0008284 | positive regulation of cell population proliferation | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009086 | methionine biosynthetic process | IEP | HCCA |
| BP | GO:0009314 | response to radiation | IEP | HCCA |
| BP | GO:0009416 | response to light stimulus | IEP | HCCA |
| BP | GO:0009628 | response to abiotic stimulus | IEP | HCCA |
| BP | GO:0009648 | photoperiodism | IEP | HCCA |
| BP | GO:0009745 | sucrose mediated signaling | IEP | HCCA |
| BP | GO:0010048 | vernalization response | IEP | HCCA |
| BP | GO:0010219 | regulation of vernalization response | IEP | HCCA |
| BP | GO:0010221 | negative regulation of vernalization response | IEP | HCCA |
| BP | GO:0016032 | viral process | IEP | HCCA |
| MF | GO:0016929 | SUMO-specific protease activity | IEP | HCCA |
| BP | GO:0022414 | reproductive process | IEP | HCCA |
| BP | GO:0030433 | ubiquitin-dependent ERAD pathway | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| MF | GO:0035064 | methylated histone binding | IEP | HCCA |
| BP | GO:0036503 | ERAD pathway | IEP | HCCA |
| BP | GO:0042127 | regulation of cell population proliferation | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0046786 | viral replication complex formation and maintenance | IEP | HCCA |
| BP | GO:0048573 | photoperiodism, flowering | IEP | HCCA |
| MF | GO:0051011 | microtubule minus-end binding | IEP | HCCA |
| BP | GO:0051026 | chiasma assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:0140013 | meiotic nuclear division | IEP | HCCA |
| MF | GO:0140030 | modification-dependent protein binding | IEP | HCCA |
| MF | GO:0140034 | methylation-dependent protein binding | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT2G40640 |