1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G40810

AT2G40810


Description : homolog of yeast autophagy 18C


Gene families : OG_01_0001311 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001311_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40810
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
Mp1g05420.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0006914 autophagy IBA Interproscan
CC GO:0031090 organelle membrane IBA Interproscan
BP GO:0042594 response to starvation IBA Interproscan
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IBA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000255 allantoin metabolic process IEP HCCA
MF GO:0000268 peroxisome targeting sequence binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000578 embryonic axis specification IEP HCCA
CC GO:0000932 P-body IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
BP GO:0001560 regulation of cell growth by extracellular stimulus IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004605 phosphatidate cytidylyltransferase activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005053 peroxisome matrix targeting signal-2 binding IEP HCCA
MF GO:0005354 galactose transmembrane transporter activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009643 photosynthetic acclimation IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010262 somatic embryogenesis IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015149 hexose transmembrane transporter activity IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017151 DEAD/H-box RNA helicase binding IEP HCCA
BP GO:0019428 allantoin biosynthetic process IEP HCCA
CC GO:0019897 extrinsic component of plasma membrane IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0031099 regeneration IEP HCCA
CC GO:0031234 extrinsic component of cytoplasmic side of plasma membrane IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0033971 hydroxyisourate hydrolase activity IEP HCCA
MF GO:0035064 methylated histone binding IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043405 regulation of MAP kinase activity IEP HCCA
BP GO:0043407 negative regulation of MAP kinase activity IEP HCCA
BP GO:0043408 regulation of MAPK cascade IEP HCCA
BP GO:0043409 negative regulation of MAPK cascade IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
MF GO:0050072 m7G(5')pppN diphosphatase activity IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0051262 protein tetramerization IEP HCCA
BP GO:0051289 protein homotetramerization IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051446 positive regulation of meiotic cell cycle IEP HCCA
MF GO:0051997 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140030 modification-dependent protein binding IEP HCCA
MF GO:0140034 methylation-dependent protein binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1900055 regulation of leaf senescence IEP HCCA
BP GO:1900056 negative regulation of leaf senescence IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 248 273
PLAZA 3.0 Dicots AT2G40810