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Description : "small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer "
Gene families : OG_01_0000042 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zci_08256.1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G67090 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38410 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38420 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38430 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Cre02.g120100 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp4g05990.1 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp4g06020.1 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c13_15800V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c13_15980V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c13_16000V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c3_12530V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c3_14510V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c3_18750V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0042255 | ribosome assembly | IEP | HCCA |
| BP | GO:0042256 | mature ribosome assembly | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0070925 | organelle assembly | IEP | HCCA |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000894 | RuBisCO_ssu_dom | 75 | 182 |
| No external refs found! |