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  5. AT2G41810

AT2G41810


Description : Protein of unknown function, DUF642


Gene families : OG_01_0001534 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G41810
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT2G34510 No alias Protein of unknown function, DUF642 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003867 4-aminobutyrate transaminase activity IEP HCCA
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005513 detection of calcium ion IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006105 succinate metabolic process IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006538 glutamate catabolic process IEP HCCA
BP GO:0006540 glutamate decarboxylation to succinate IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006598 polyamine catabolic process IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008300 isoprenoid catabolic process IEP HCCA
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP HCCA
BP GO:0009065 glutamine family amino acid catabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009448 gamma-aminobutyric acid metabolic process IEP HCCA
BP GO:0009450 gamma-aminobutyric acid catabolic process IEP HCCA
BP GO:0009645 response to low light intensity stimulus IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009804 coumarin metabolic process IEP HCCA
BP GO:0009805 coumarin biosynthetic process IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0009819 drought recovery IEP HCCA
BP GO:0009865 pollen tube adhesion IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010030 positive regulation of seed germination IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010244 response to low fluence blue light stimulus by blue low-fluence system IEP HCCA
MF GO:0010283 pinoresinol reductase activity IEP HCCA
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015174 basic amino acid transmembrane transporter activity IEP HCCA
CC GO:0015630 microtubule cytoskeleton IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016103 diterpenoid catabolic process IEP HCCA
BP GO:0016115 terpenoid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016621 cinnamoyl-CoA reductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016841 ammonia-lyase activity IEP HCCA
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0019218 regulation of steroid metabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019336 phenol-containing compound catabolic process IEP HCCA
BP GO:0019482 beta-alanine metabolic process IEP HCCA
BP GO:0019484 beta-alanine catabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031445 regulation of heterochromatin assembly IEP HCCA
BP GO:0031453 positive regulation of heterochromatin assembly IEP HCCA
BP GO:0032350 regulation of hormone metabolic process IEP HCCA
MF GO:0034387 4-aminobutyrate:pyruvate transaminase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042754 negative regulation of circadian rhythm IEP HCCA
BP GO:0043649 dicarboxylic acid catabolic process IEP HCCA
BP GO:0044089 positive regulation of cellular component biogenesis IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045176 apical protein localization IEP HCCA
BP GO:0045487 gibberellin catabolic process IEP HCCA
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP HCCA
MF GO:0045548 phenylalanine ammonia-lyase activity IEP HCCA
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP HCCA
BP GO:0046244 salicylic acid catabolic process IEP HCCA
BP GO:0046271 phenylpropanoid catabolic process IEP HCCA
BP GO:0046274 lignin catabolic process IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0046885 regulation of hormone biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050810 regulation of steroid biosynthetic process IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051703 biological process involved in intraspecies interaction between organisms IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0052033 obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response IEP HCCA
MF GO:0052634 C-19 gibberellin 2-beta-dioxygenase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071497 cellular response to freezing IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0080107 8-methylthiopropyl glucosinolate S-oxygenase activity IEP HCCA
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP HCCA
BP GO:0090308 regulation of DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0090309 positive regulation of DNA methylation-dependent heterochromatin assembly IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098609 cell-cell adhesion IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:0120261 regulation of heterochromatin organization IEP HCCA
BP GO:0120263 positive regulation of heterochromatin organization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902275 regulation of chromatin organization IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905269 positive regulation of chromatin organization IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
BP GO:2001252 positive regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR006946 DUF642 32 188
IPR006946 DUF642 199 366
PLAZA 3.0 Dicots AT2G41810