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  5. Zci_09414.1

Zci_09414.1


Description : component SHL/EBS of PRC1 complex


Gene families : OG_01_0000572 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_09414.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Cre16.g675246 No alias Chromatin organisation.histone modifications.histone... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004529 exodeoxyribonuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0008409 5'-3' exonuclease activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP HCCA
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 140 188
IPR001025 BAH_dom 22 135
No external refs found!