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  5. AT2G42460

AT2G42460


Description : TRAF-like family protein


Gene families : OG_01_0000081 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G42460
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31380 No alias TRAF-like family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31390 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31400 No alias TRAF-like family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G01790 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05410 No alias TRAF-like family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05420 No alias TRAF-like family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42455 No alias No description available 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42465 No alias No description available 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42470 No alias TRAF-like family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42475 No alias No description available 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G42480 No alias TRAF-like family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58210 No alias TRAF-like family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58240 No alias TRAF-like superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58260 No alias TRAF-like family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58290 No alias TRAF-like superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58300 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58330 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58340 No alias TRAF-like family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58360 No alias TRAF-like family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58370 No alias TRAF-like family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58400 No alias TRAF-like family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58440 No alias TRAF-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 14 132
PLAZA 3.0 Dicots AT2G42460