1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_09695.1

Zci_09695.1


Description : component Clp1 of Cleavage Factor II (CF-IIm) complex


Gene families : OG_01_0006151 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006151_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_09695.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT3G04680 No alias CLP-similar protein 3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0031124 mRNA 3'-end processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
CC GO:0045273 respiratory chain complex II IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR010655 Clp1_C 431 542
IPR032324 Clp1_N 103 212
IPR032319 CLP1_P 238 426
No external refs found!