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  5. Zci_09851.1

Zci_09851.1


Description : component eS7 of SSU proteome


Gene families : OG_01_0001699 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_09851.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT1G48830 No alias Ribosomal protein S7e family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G02560 No alias Ribosomal protein S7e family protein 0.26 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G16130 No alias Ribosomal protein S7e family protein 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g498900 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g08120.1 No alias component RPS7 of SSU proteome 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_1360V3.1 No alias Ribosomal protein S7e family protein 0.38 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_18280V3.1 No alias Ribosomal protein S7e family protein 0.31 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_18220V3.1 No alias Ribosomal protein S7e family protein 0.24 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_22480V3.1 No alias Ribosomal protein S7e family protein 0.3 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005253 anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR000554 Ribosomal_S7e 7 187
No external refs found!