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  5. Zci_11195.5

Zci_11195.5


Description : class-III histone methyltransferase (Trx)


Gene families : OG_01_0000838 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000838_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_11195.5
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Zci_11195.1 No alias class-III histone methyltransferase (Trx) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
BP GO:0006323 DNA packaging IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000770 SAND_dom 863 935
IPR000313 PWWP_dom 611 709
IPR001214 SET_dom 1312 1363
No external refs found!