1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_11372.3

Zci_11372.3


Description : no annotation


Gene families : OG_01_0001028 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_11372.3
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Zci_11776.2 No alias no hits & (original description: none) 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_11782.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12191.1 No alias no annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_13710.1 No alias no annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_15393.1 No alias no annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 117 200
No external refs found!