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  5. Zci_11573.5

Zci_11573.5


Description : no annotation


Gene families : OG_01_0001310 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_11573.5
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AT1G03060 No alias Beige/BEACH domain ;WD domain, G-beta repeat protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_26100V3.1 No alias Beige/BEACH domain ;WD domain, G-beta repeat protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
InterPro domains Description Start Stop
IPR000409 BEACH_dom 2366 2643
IPR000306 Znf_FYVE 3025 3079
IPR001680 WD40_repeat 2771 2808
IPR001680 WD40_repeat 2728 2757
IPR023362 PH-BEACH_dom 2276 2327
IPR031570 DUF4704 817 1002
No external refs found!