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  5. Zci_11875.1

Zci_11875.1


Description : regulatory protein (SCAMP) of exocytic trafficking


Gene families : OG_01_0000835 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000835_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_11875.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT1G61250 No alias secretory carrier 3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre02.g089900 No alias Secretory carrier-associated membrane protein 5 OS=Oryza... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g20380.1 No alias Putative secretory carrier-associated membrane protein 1... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_8700V3.1 No alias secretory carrier 3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR019273 Lunapark_dom 359 409
IPR007273 SCAMP 535 711
No external refs found!