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  5. Zci_11918.1

Zci_11918.1


Description : subunit beta2 of coat protein complex


Gene families : OG_01_0002892 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_11918.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT1G52360 No alias Coatomer, beta' subunit 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G79990 No alias structural molecules 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre02.g118500 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g04060.1 No alias subunit beta2 of coat protein complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
MF GO:0033218 amide binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 177 215
IPR001680 WD40_repeat 220 256
IPR001680 WD40_repeat 16 43
IPR001680 WD40_repeat 132 171
IPR001680 WD40_repeat 91 127
IPR006692 Coatomer_WD-assoc_reg 319 763
No external refs found!