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  5. Zci_11939.1

Zci_11939.1


Description : component uL3 of LSU proteome component


Gene families : OG_01_0002090 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_11939.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT1G43170 No alias ribosomal protein 1 0.15 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g417700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g18990.1 No alias component RPL3 of LSU proteome component 0.25 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_25460V3.1 No alias R-protein L3 B 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_27000V3.1 No alias R-protein L3 B 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_27030V3.1 No alias R-protein L3 B 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005253 anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR000597 Ribosomal_L3 1 190
No external refs found!