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  5. Zci_12003.1

Zci_12003.1


Description : histone (H2B)


Gene families : OG_01_0000046 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_12003.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT1G07790 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45980 No alias Histone superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G46030 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59910 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g264900 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g271376 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g273850 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274250 No alias Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g275800 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276550 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504700 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506200 No alias Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g570050 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g590750 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g591200 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g709150 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g710450 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g711750 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g713450 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714050 No alias Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g07010.1 No alias histone (H2B) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_21050V3.1 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c6_27740V3.1 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 4 119
No external refs found!