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  5. Zci_12108.2

Zci_12108.2


Description : ubiquitination activator protein (CDC20)


Gene families : OG_01_0000364 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_12108.2
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT4G33260 No alias Transducin family protein / WD-40 repeat family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g399911 No alias Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g15730.1 No alias CDC20-type (APC/C)-dependent ubiquitination activator protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_6330V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0018298 protein-chromophore linkage IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 288 322
IPR001680 WD40_repeat 348 386
IPR001680 WD40_repeat 436 471
IPR024977 Apc4_WD40_dom 196 262
No external refs found!