1. Home
  2. Species
  3. Zygnema circumcarinatum
  4. Sequence
  5. Zci_12270.1

Zci_12270.1


Description : no annotation


Gene families : OG_01_0000522 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000522_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_12270.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Zci_12270.3 No alias no annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12270.5 No alias no annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12270.6 No alias no annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12280.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007160 cell-matrix adhesion IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0022610 biological adhesion IEP HCCA
BP GO:0031589 cell-substrate adhesion IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 44 99
IPR001611 Leu-rich_rpt 21 43
No external refs found!