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  5. Zci_12270.6

Zci_12270.6


Description : no annotation


Gene families : OG_01_0000522 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000522_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_12270.6
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Zci_12270.1 No alias no annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12270.4 No alias no annotation 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12280.1 No alias no hits & (original description: none) 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 464 502
IPR001611 Leu-rich_rpt 177 236
IPR001611 Leu-rich_rpt 578 633
IPR001611 Leu-rich_rpt 80 140
IPR001611 Leu-rich_rpt 555 577
IPR001611 Leu-rich_rpt 532 550
No external refs found!