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  5. Zci_12408.2

Zci_12408.2


Description : AP-endonuclease (APE2)


Gene families : OG_01_0001694 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_12408.2
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Zci_12408.1 No alias AP-endonuclease (APE2) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12408.4 No alias AP-endonuclease (APE2) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12408.6 No alias AP-endonuclease (APE2) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0030144 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 23 132
No external refs found!