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  5. Zci_12634.1

Zci_12634.1


Description : component SERRATE of DCL1-HYL1 miRNA biogenesis complex


Gene families : OG_01_0002761 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_12634.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT2G27100 No alias C2H2 zinc-finger protein SERRATE (SE) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_11390V3.1 No alias C2H2 zinc-finger protein SERRATE (SE) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007042 SERRATE/Ars2_C 262 417
IPR021933 SERRATE/Ars2_N 20 111
No external refs found!