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  5. Zci_13248.1

Zci_13248.1


Description : no annotation


Gene families : OG_01_0005909 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_13248.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cre17.g721700 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_17930V3.1 No alias Pentapeptide repeat-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 74 113
IPR001646 5peptide_repeat 211 245
No external refs found!