AT2G46710

Description : Rho GTPase activating protein with PAK-box/P21-Rho-binding domain

Gene families : OG_01_0000871 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000871_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G46710
Cluster	HCCA: Cluster_216

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G08340	No alias	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_5940V3.1	No alias	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009505	plant-type cell wall	None	Extended
CC	GO:0009531	secondary cell wall	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009664	plant-type cell wall organization	IMP	Interproscan
BP	GO:0009914	hormone transport	None	Extended
BP	GO:0009926	auxin polar transport	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010218	response to far red light	RCA	Interproscan
BP	GO:0010817	regulation of hormone levels	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0060918	auxin transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000036	acyl carrier activity	IEP	HCCA
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
BP	GO:0000578	embryonic axis specification	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0001558	regulation of cell growth	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	HCCA
MF	GO:0004312	fatty acid synthase activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005310	dicarboxylic acid transmembrane transporter activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006835	dicarboxylic acid transport	IEP	HCCA
BP	GO:0006879	cellular iron ion homeostasis	IEP	HCCA
BP	GO:0006949	syncytium formation	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0008156	negative regulation of DNA replication	IEP	HCCA
CC	GO:0008180	COP9 signalosome	IEP	HCCA
BP	GO:0008361	regulation of cell size	IEP	HCCA
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	HCCA
BP	GO:0009411	response to UV	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009638	phototropism	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
MF	GO:0009672	auxin:proton symporter activity	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009739	response to gibberellin	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
BP	GO:0009785	blue light signaling pathway	IEP	HCCA
BP	GO:0009798	axis specification	IEP	HCCA
BP	GO:0009825	multidimensional cell growth	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
BP	GO:0009942	longitudinal axis specification	IEP	HCCA
CC	GO:0009986	cell surface	IEP	HCCA
BP	GO:0010015	root morphogenesis	IEP	HCCA
BP	GO:0010026	trichome differentiation	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010082	regulation of root meristem growth	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
BP	GO:0010315	auxin efflux	IEP	HCCA
MF	GO:0010329	auxin efflux transmembrane transporter activity	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
CC	GO:0012506	vesicle membrane	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	HCCA
MF	GO:0015140	malate transmembrane transporter activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015293	symporter activity	IEP	HCCA
MF	GO:0015294	solute:cation symporter activity	IEP	HCCA
MF	GO:0015295	solute:proton symporter activity	IEP	HCCA
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	HCCA
BP	GO:0015740	C4-dicarboxylate transport	IEP	HCCA
BP	GO:0015743	malate transport	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
MF	GO:0016297	acyl-[acyl-carrier-protein] hydrolase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
CC	GO:0016328	lateral plasma membrane	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	HCCA
MF	GO:0019104	DNA N-glycosylase activity	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
BP	GO:0030308	negative regulation of cell growth	IEP	HCCA
BP	GO:0030522	intracellular receptor signaling pathway	IEP	HCCA
MF	GO:0030570	pectate lyase activity	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032876	negative regulation of DNA endoreduplication	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of ion transmembrane transport	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
BP	GO:0043269	regulation of ion transport	IEP	HCCA
BP	GO:0043473	pigmentation	IEP	HCCA
BP	GO:0043476	pigment accumulation	IEP	HCCA
BP	GO:0043478	pigment accumulation in response to UV light	IEP	HCCA
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0043480	pigment accumulation in tissues	IEP	HCCA
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	HCCA
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0044620	ACP phosphopantetheine attachment site binding	IEP	HCCA
CC	GO:0045298	tubulin complex	IEP	HCCA
BP	GO:0045926	negative regulation of growth	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
BP	GO:0048588	developmental cell growth	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048766	root hair initiation	IEP	HCCA
BP	GO:0048767	root hair elongation	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
MF	GO:0051192	prosthetic group binding	IEP	HCCA
BP	GO:0051513	regulation of monopolar cell growth	IEP	HCCA
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	HCCA
BP	GO:0071423	malate transmembrane transport	IEP	HCCA
MF	GO:0080054	low-affinity nitrate transmembrane transporter activity	IEP	HCCA
MF	GO:0080161	auxin transmembrane transporter activity	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:0140414	phosphopantetheine-dependent carrier activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1903825	organic acid transmembrane transport	IEP	HCCA
BP	GO:1904062	regulation of cation transmembrane transport	IEP	HCCA
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA
BP	GO:2000038	regulation of stomatal complex development	IEP	HCCA
BP	GO:2000104	negative regulation of DNA-dependent DNA replication	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000198	RhoGAP_dom	167	301
IPR000095	CRIB_dom	104	133

External Links

PLAZA 3.0 Dicots	AT2G46710

AT2G46710

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation