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  5. Zci_13939.1

Zci_13939.1


Description : monomeric E3 ubiquitin ligase (HECT)


Gene families : OG_01_0001504 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_13939.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT1G55860 No alias ubiquitin-protein ligase 1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G70320 No alias ubiquitin-protein ligase 2 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_8076V3.1 No alias ubiquitin-protein ligase 1 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0047834 D-threo-aldose 1-dehydrogenase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR025527 HUWE1/Rev1_UBM 2698 2722
IPR025527 HUWE1/Rev1_UBM 2732 2763
IPR025527 HUWE1/Rev1_UBM 2652 2678
IPR000569 HECT_dom 3616 3926
IPR010314 E3_Ub_ligase_DUF913 120 518
IPR015940 UBA 1058 1095
No external refs found!