Description : nucleocytoplasmic import karyopherin (IMB2)
Gene families : OG_01_0002896 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002896_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zci_14077.3 | |
Cluster | HCCA: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G16950 | No alias | transportin 1 | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
Cre12.g520550 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.01 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
Pp3c6_18200V3.1 | No alias | transportin 1 | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
MF | GO:0031267 | small GTPase binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | HCCA |
MF | GO:0005244 | voltage-gated ion channel activity | IEP | HCCA |
MF | GO:0005247 | voltage-gated chloride channel activity | IEP | HCCA |
MF | GO:0005253 | anion channel activity | IEP | HCCA |
MF | GO:0005254 | chloride channel activity | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006811 | ion transport | IEP | HCCA |
BP | GO:0006820 | anion transport | IEP | HCCA |
BP | GO:0006821 | chloride transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0008242 | omega peptidase activity | IEP | HCCA |
MF | GO:0008308 | voltage-gated anion channel activity | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
MF | GO:0010181 | FMN binding | IEP | HCCA |
MF | GO:0015075 | ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | HCCA |
MF | GO:0022832 | voltage-gated channel activity | IEP | HCCA |
MF | GO:0022836 | gated channel activity | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001494 | Importin-beta_N | 115 | 183 |
No external refs found! |