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  5. Zci_14808.1

Zci_14808.1


Description : component uL13c of large ribosomal subunit proteome


Gene families : OG_01_0003788 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003788_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_14808.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT1G78630 No alias Ribosomal protein L13 family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g264350 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g07030.1 No alias component psRPL13 of large ribosomal subunit proteome 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_2980V3.1 No alias Ribosomal protein L13 family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_22490V3.1 No alias Ribosomal protein L13 family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0034998 oligosaccharyltransferase I complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097573 glutathione oxidoreductase activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 148 266
No external refs found!