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  5. Zci_15066.1

Zci_15066.1


Description : component uS17 of SSU proteome


Gene families : OG_01_0001240 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_15066.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT3G48930 No alias Nucleic acid-binding, OB-fold-like protein 0.31 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G30800 No alias Nucleic acid-binding, OB-fold-like protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G23740 No alias ribosomal protein S11-beta 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g514500 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.29 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g23360.1 No alias component RPS11 of SSU proteome 0.22 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g10500.1 No alias component RPS11 of SSU proteome 0.34 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_9600V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.29 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_27980V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.36 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_13690V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.25 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3s116_30V3.1 No alias Nucleic acid-binding, OB-fold-like protein 0.24 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR032440 Ribosomal_S11_N 46 117
IPR000266 Ribosomal_S17/S11 119 187
No external refs found!