AT3G01470


Description : homeobox 1


Gene families : OG_01_0000195 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G01470
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Pp3c7_2100V3.1 No alias Homeobox-leucine zipper protein family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0009637 response to blue light IEP Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
BP GO:0009965 leaf morphogenesis IMP Interproscan
BP GO:0010167 response to nitrate RCA Interproscan
BP GO:0015706 nitrate transport RCA Interproscan
BP GO:0015996 chlorophyll catabolic process RCA Interproscan
MF GO:0042803 protein homodimerization activity IDA Interproscan
MF GO:0043565 sequence-specific DNA binding IDA Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000719 photoreactive repair IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0001944 vasculature development IEP HCCA
MF GO:0002020 protease binding IEP HCCA
BP GO:0002832 negative regulation of response to biotic stimulus IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006290 pyrimidine dimer repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006833 water transport IEP HCCA
BP GO:0006858 extracellular transport IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007568 aging IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008477 purine nucleosidase activity IEP HCCA
MF GO:0008805 carbon-monoxide oxygenase activity IEP HCCA
MF GO:0008930 methylthioadenosine nucleosidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010350 cellular response to magnesium starvation IEP HCCA
BP GO:0010483 pollen tube reception IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010555 response to mannitol IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016622 oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0018008 N-terminal peptidyl-glycine N-myristoylation IEP HCCA
BP GO:0018201 peptidyl-glycine modification IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019509 L-methionine salvage from methylthioadenosine IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030104 water homeostasis IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031111 negative regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP HCCA
BP GO:0031113 regulation of microtubule polymerization IEP HCCA
BP GO:0031114 regulation of microtubule depolymerization IEP HCCA
BP GO:0031115 negative regulation of microtubule polymerization IEP HCCA
BP GO:0031117 positive regulation of microtubule depolymerization IEP HCCA
BP GO:0031122 cytoplasmic microtubule organization IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0031331 positive regulation of cellular catabolic process IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032026 response to magnesium ion IEP HCCA
BP GO:0032102 negative regulation of response to external stimulus IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0032886 regulation of microtubule-based process IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0035864 response to potassium ion IEP HCCA
BP GO:0035865 cellular response to potassium ion IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042044 fluid transport IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043102 amino acid salvage IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
MF GO:0043325 phosphatidylinositol-3,4-bisphosphate binding IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0043622 cortical microtubule organization IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
CC GO:0043674 columella IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044766 multi-organism transport IEP HCCA
BP GO:0045732 positive regulation of protein catabolic process IEP HCCA
BP GO:0045862 positive regulation of proteolysis IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
MF GO:0047209 coniferyl-alcohol glucosyltransferase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048640 negative regulation of developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051495 positive regulation of cytoskeleton organization IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051511 negative regulation of unidimensional cell growth IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051703 biological process involved in intraspecies interaction between organisms IEP HCCA
MF GO:0051740 ethylene binding IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0061136 regulation of proteasomal protein catabolic process IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071219 cellular response to molecule of bacterial origin IEP HCCA
BP GO:0071265 L-methionine biosynthetic process IEP HCCA
BP GO:0071267 L-methionine salvage IEP HCCA
BP GO:0071280 cellular response to copper ion IEP HCCA
BP GO:0071286 cellular response to magnesium ion IEP HCCA
BP GO:0071322 cellular response to carbohydrate stimulus IEP HCCA
BP GO:0071325 cellular response to mannitol stimulus IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
MF GO:0072328 alkene binding IEP HCCA
BP GO:0072708 response to sorbitol IEP HCCA
BP GO:0072709 cellular response to sorbitol IEP HCCA
BP GO:0075733 intracellular transport of virus IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
BP GO:0080170 hydrogen peroxide transmembrane transport IEP HCCA
BP GO:1900424 regulation of defense response to bacterium IEP HCCA
BP GO:1900425 negative regulation of defense response to bacterium IEP HCCA
BP GO:1901483 regulation of transcription factor catabolic process IEP HCCA
BP GO:1901485 positive regulation of transcription factor catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901881 positive regulation of protein depolymerization IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA
BP GO:1902579 multi-organism localization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
BP GO:1902905 positive regulation of supramolecular fiber organization IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903050 regulation of proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:1903052 positive regulation of proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:1903362 regulation of cellular protein catabolic process IEP HCCA
BP GO:1903364 positive regulation of cellular protein catabolic process IEP HCCA
BP GO:2000058 regulation of ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 123 165
IPR001356 Homeobox_dom 68 121
PLAZA 3.0 Dicots AT3G01470