AT3G01810

Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1327 Blast hits to 470 proteins in 132 species: Archae - 2; Bacteria - 131; Metazoa - 139; Fungi - 114; Plants - 114; Viruses - 0; Other Eukaryotes - 827 (source: NCBI BLink).

Gene families : OG_01_0002102 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002102_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G01810
Cluster	HCCA: Cluster_186

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT2G42320	No alias	nucleolar protein gar2-related	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G06930	No alias	LOCATED IN: chloroplast; EXPRESSED IN: 15 plant...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	RCA	Interproscan
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	RCA	Interproscan
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009664	plant-type cell wall organization	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004441	inositol-1,4-bisphosphate 1-phosphatase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	HCCA
MF	GO:0005355	glucose transmembrane transporter activity	IEP	HCCA
BP	GO:0006811	ion transport	IEP	HCCA
BP	GO:0006812	cation transport	IEP	HCCA
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
MF	GO:0008252	nucleotidase activity	IEP	HCCA
MF	GO:0008441	3'(2'),5'-bisphosphate nucleotidase activity	IEP	HCCA
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
CC	GO:0009705	plant-type vacuole membrane	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0009968	negative regulation of signal transduction	IEP	HCCA
BP	GO:0010039	response to iron ion	IEP	HCCA
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	HCCA
BP	GO:0010586	miRNA metabolic process	IEP	HCCA
BP	GO:0010587	miRNA catabolic process	IEP	HCCA
BP	GO:0010648	negative regulation of cell communication	IEP	HCCA
BP	GO:0010959	regulation of metal ion transport	IEP	HCCA
MF	GO:0015075	ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015120	phosphoglycerate transmembrane transporter activity	IEP	HCCA
MF	GO:0015145	monosaccharide transmembrane transporter activity	IEP	HCCA
MF	GO:0015149	hexose transmembrane transporter activity	IEP	HCCA
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	HCCA
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	HCCA
BP	GO:0015712	hexose phosphate transport	IEP	HCCA
BP	GO:0015713	phosphoglycerate transmembrane transport	IEP	HCCA
BP	GO:0015717	triose phosphate transport	IEP	HCCA
BP	GO:0015718	monocarboxylic acid transport	IEP	HCCA
BP	GO:0015748	organophosphate ester transport	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016312	inositol bisphosphate phosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
BP	GO:0019216	regulation of lipid metabolic process	IEP	HCCA
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
BP	GO:0019932	second-messenger-mediated signaling	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0023057	negative regulation of signaling	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0030307	positive regulation of cell growth	IEP	HCCA
BP	GO:0034661	ncRNA catabolic process	IEP	HCCA
BP	GO:0035436	triose phosphate transmembrane transport	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0042304	regulation of fatty acid biosynthetic process	IEP	HCCA
BP	GO:0042873	aldonate transmembrane transport	IEP	HCCA
MF	GO:0042879	aldonate transmembrane transporter activity	IEP	HCCA
BP	GO:0043157	response to cation stress	IEP	HCCA
BP	GO:0043266	regulation of potassium ion transport	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	HCCA
BP	GO:0048015	phosphatidylinositol-mediated signaling	IEP	HCCA
BP	GO:0048017	inositol lipid-mediated signaling	IEP	HCCA
BP	GO:0048639	positive regulation of developmental growth	IEP	HCCA
BP	GO:0048653	anther development	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
MF	GO:0051119	sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0051512	positive regulation of unidimensional cell growth	IEP	HCCA
MF	GO:0052745	inositol phosphate phosphatase activity	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
MF	GO:0071917	triose-phosphate transmembrane transporter activity	IEP	HCCA
BP	GO:0080140	regulation of jasmonic acid metabolic process	IEP	HCCA
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IEP	HCCA
BP	GO:0098656	anion transmembrane transport	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019448	NT-C2	15	160

External Links

PLAZA 3.0 Dicots	AT3G01810

AT3G01810

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation