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AT3G02010


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0000019 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G02010
Cluster HCCA: Cluster_72


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009756 carbohydrate mediated signaling IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0010182 sugar mediated signaling pathway IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 517 563
IPR002885 Pentatricopeptide_repeat 109 157
IPR002885 Pentatricopeptide_repeat 213 260
IPR002885 Pentatricopeptide_repeat 416 461
IPR002885 Pentatricopeptide_repeat 592 615
IPR002885 Pentatricopeptide_repeat 317 347
IPR002885 Pentatricopeptide_repeat 390 412
IPR002885 Pentatricopeptide_repeat 80 108
IPR002885 Pentatricopeptide_repeat 493 516
IPR002885 Pentatricopeptide_repeat 658 687
IPR032867 DYW_dom 693 814
PLAZA 3.0 Dicots AT3G02010