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AT3G02290


Description : RING/U-box superfamily protein


Gene families : OG_01_0001143 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G02290
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
Zci_04037.1 No alias no annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
BP GO:0000578 embryonic axis specification IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003691 double-stranded telomeric DNA binding IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0004930 G protein-coupled receptor activity IEP HCCA
MF GO:0005344 oxygen carrier activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006983 ER overload response IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
MF GO:0008020 G protein-coupled photoreceptor activity IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009301 snRNA transcription IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009798 axis specification IEP HCCA
MF GO:0009881 photoreceptor activity IEP HCCA
MF GO:0009883 red or far-red light photoreceptor activity IEP HCCA
BP GO:0009942 longitudinal axis specification IEP HCCA
BP GO:0009945 radial axis specification IEP HCCA
CC GO:0010008 endosome membrane IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
CC GO:0012506 vesicle membrane IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
BP GO:0015669 gas transport IEP HCCA
BP GO:0015671 oxygen transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015865 purine nucleotide transport IEP HCCA
BP GO:0015866 ADP transport IEP HCCA
BP GO:0015867 ATP transport IEP HCCA
BP GO:0015868 purine ribonucleotide transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016578 histone deubiquitination IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
CC GO:0030659 cytoplasmic vesicle membrane IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043696 dedifferentiation IEP HCCA
BP GO:0043697 cell dedifferentiation IEP HCCA
BP GO:0045003 double-strand break repair via synthesis-dependent strand annealing IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0051503 adenine nucleotide transport IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0060184 cell cycle switching IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071365 cellular response to auxin stimulus IEP HCCA
BP GO:0071368 cellular response to cytokinin stimulus IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
BP GO:0080024 indolebutyric acid metabolic process IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0090351 seedling development IEP HCCA
BP GO:0098781 ncRNA transcription IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 178 221
PLAZA 3.0 Dicots AT3G02290