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  5. Zci_15884.1

Zci_15884.1


Description : no annotation


Gene families : OG_01_0000116 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zci_15884.1
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Zci_07307.1 No alias no annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07376.1 No alias pathogen polygalacturonase inhibitor (PGIP) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07376.2 No alias pathogen polygalacturonase inhibitor (PGIP) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07479.1 No alias no annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07532.1 No alias no annotation 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 197 249
IPR001611 Leu-rich_rpt 173 195
No external refs found!