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  5. AT3G03340

AT3G03340


Description : LUC7 related protein


Gene families : OG_01_0002545 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G03340
Cluster HCCA: Cluster_179


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0008284 positive regulation of cell population proliferation RCA Interproscan
BP GO:0009567 double fertilization forming a zygote and endosperm IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000014 single-stranded DNA endodeoxyribonuclease activity IEP HCCA
CC GO:0000109 nucleotide-excision repair complex IEP HCCA
CC GO:0000110 nucleotide-excision repair factor 1 complex IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000710 meiotic mismatch repair IEP HCCA
BP GO:0000712 resolution of meiotic recombination intermediates IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
CC GO:0000932 P-body IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004520 endodeoxyribonuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
MF GO:0016929 SUMO-specific protease activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
BP GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0033683 nucleotide-excision repair, DNA incision IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0050072 m7G(5')pppN diphosphatase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
CC GO:1990391 DNA repair complex IEP HCCA
InterPro domains Description Start Stop
IPR004882 Luc7-rel 207 324
IPR004882 Luc7-rel 2 171
PLAZA 3.0 Dicots AT3G03340