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AT3G03410


Description : EF hand calcium-binding protein family


Gene families : OG_01_0007868 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007868_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G03410
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT2G36180 No alias EF hand calcium-binding protein family 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G03400 No alias EF hand calcium-binding protein family 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G17470 No alias EF hand calcium-binding protein family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 39 60
IPR002048 EF_hand_dom 5 26
IPR002048 EF_hand_dom 66 127
PLAZA 3.0 Dicots AT3G03410