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  5. AT3G04100

AT3G04100


Description : AGAMOUS-like 57


Gene families : OG_01_0006484 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006484_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G04100
Cluster HCCA: Cluster_396

Target Alias Description ECC score Gene Family Method Actions
AT1G28450 No alias AGAMOUS-like 58 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G29962 No alias AGAMOUS-like 64 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
MF GO:0004707 MAP kinase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
MF GO:0052622 ATP dimethylallyltransferase activity IEP HCCA
MF GO:0052623 ADP dimethylallyltransferase activity IEP HCCA
BP GO:0060688 regulation of morphogenesis of a branching structure IEP HCCA
BP GO:1905428 regulation of plant organ formation IEP HCCA
BP GO:2000032 regulation of secondary shoot formation IEP HCCA
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 22 69
PLAZA 3.0 Dicots AT3G04100