1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G05950

AT3G05950


Description : RmlC-like cupins superfamily protein


Gene families : OG_01_0000087 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G05950
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT1G18970 No alias germin-like protein 4 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G18980 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G74820 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G14630 No alias germin-like protein 9 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38910 No alias RmlC-like cupins superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38930 No alias RmlC-like cupins superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38940 No alias RmlC-like cupins superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39110 No alias RmlC-like cupins superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39120 No alias RmlC-like cupins superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39150 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39180 No alias RmlC-like cupins superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000249 C-22 sterol desaturase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0005217 intracellular ligand-gated ion channel activity IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
BP GO:0010101 post-embryonic root morphogenesis IEP HCCA
BP GO:0010102 lateral root morphogenesis IEP HCCA
BP GO:0010263 tricyclic triterpenoid biosynthetic process IEP HCCA
BP GO:0010683 tricyclic triterpenoid metabolic process IEP HCCA
MF GO:0015276 ligand-gated ion channel activity IEP HCCA
BP GO:0016104 triterpenoid biosynthetic process IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP HCCA
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0031559 oxidosqualene cyclase activity IEP HCCA
MF GO:0034075 arabidiol synthase activity IEP HCCA
BP GO:0045338 farnesyl diphosphate metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
MF GO:0070704 sterol desaturase activity IEP HCCA
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP HCCA
BP GO:0072507 divalent inorganic cation homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 65 215
PLAZA 3.0 Dicots AT3G05950