- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : RING/U-box superfamily protein
Gene families : OG_01_0012248 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G06140 | |
| Cluster | HCCA: Cluster_109 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IDA | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000030 | mannosyltransferase activity | IEP | HCCA |
| MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
| MF | GO:0004551 | nucleotide diphosphatase activity | IEP | HCCA |
| MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | HCCA |
| MF | GO:0004856 | xylulokinase activity | IEP | HCCA |
| MF | GO:0004871 | obsolete signal transducer activity | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| CC | GO:0005794 | Golgi apparatus | IEP | HCCA |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | HCCA |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | HCCA |
| BP | GO:0006626 | protein targeting to mitochondrion | IEP | HCCA |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
| BP | GO:0006839 | mitochondrial transport | IEP | HCCA |
| BP | GO:0007021 | tubulin complex assembly | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| BP | GO:0008216 | spermidine metabolic process | IEP | HCCA |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | HCCA |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | HCCA |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | HCCA |
| MF | GO:0015562 | efflux transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016778 | diphosphotransferase activity | IEP | HCCA |
| MF | GO:0016882 | cyclo-ligase activity | IEP | HCCA |
| MF | GO:0030272 | 5-formyltetrahydrofolate cyclo-ligase activity | IEP | HCCA |
| BP | GO:0030433 | ubiquitin-dependent ERAD pathway | IEP | HCCA |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
| BP | GO:0036503 | ERAD pathway | IEP | HCCA |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0043393 | regulation of protein binding | IEP | HCCA |
| BP | GO:0043496 | regulation of protein homodimerization activity | IEP | HCCA |
| BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | HCCA |
| MF | GO:0047884 | FAD diphosphatase activity | IEP | HCCA |
| BP | GO:0050829 | defense response to Gram-negative bacterium | IEP | HCCA |
| BP | GO:0051098 | regulation of binding | IEP | HCCA |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | HCCA |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT3G06140 |