- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT5G47600.1); Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene families : OG_01_0012000 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G12180 | |
| Cluster | HCCA: Cluster_71 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| BP | GO:0009408 | response to heat | RCA | Interproscan |
| BP | GO:0009644 | response to high light intensity | RCA | Interproscan |
| BP | GO:0042542 | response to hydrogen peroxide | RCA | Interproscan |
| BP | GO:0048445 | carpel morphogenesis | RCA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| BP | GO:0006885 | regulation of pH | IEP | HCCA |
| BP | GO:0007035 | vacuolar acidification | IEP | HCCA |
| BP | GO:0008360 | regulation of cell shape | IEP | HCCA |
| MF | GO:0008474 | palmitoyl-(protein) hydrolase activity | IEP | HCCA |
| MF | GO:0008889 | glycerophosphodiester phosphodiesterase activity | IEP | HCCA |
| BP | GO:0009553 | embryo sac development | IEP | HCCA |
| BP | GO:0009739 | response to gibberellin | IEP | HCCA |
| BP | GO:0010023 | proanthocyanidin biosynthetic process | IEP | HCCA |
| BP | GO:0010052 | guard cell differentiation | IEP | HCCA |
| BP | GO:0010374 | stomatal complex development | IEP | HCCA |
| BP | GO:0010430 | fatty acid omega-oxidation | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030004 | cellular monovalent inorganic cation homeostasis | IEP | HCCA |
| BP | GO:0030641 | regulation of cellular pH | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0045544 | gibberellin 20-oxidase activity | IEP | HCCA |
| MF | GO:0045547 | dehydrodolichyl diphosphate synthase activity | IEP | HCCA |
| BP | GO:0045851 | pH reduction | IEP | HCCA |
| MF | GO:0046593 | mandelonitrile lyase activity | IEP | HCCA |
| BP | GO:0048316 | seed development | IEP | HCCA |
| BP | GO:0048440 | carpel development | IEP | HCCA |
| BP | GO:0048608 | reproductive structure development | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0051452 | intracellular pH reduction | IEP | HCCA |
| BP | GO:0051453 | regulation of intracellular pH | IEP | HCCA |
| BP | GO:0080051 | cutin transport | IEP | HCCA |
| BP | GO:0080154 | regulation of fertilization | IEP | HCCA |
| BP | GO:0080155 | regulation of double fertilization forming a zygote and endosperm | IEP | HCCA |
| BP | GO:0080172 | petal epidermis patterning | IEP | HCCA |
| BP | GO:0090558 | plant epidermis development | IEP | HCCA |
| MF | GO:0098599 | palmitoyl hydrolase activity | IEP | HCCA |
| BP | GO:1900376 | regulation of secondary metabolite biosynthetic process | IEP | HCCA |
| BP | GO:2000029 | regulation of proanthocyanidin biosynthetic process | IEP | HCCA |
| BP | GO:2000762 | regulation of phenylpropanoid metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT1G12180 |