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  5. AT3G10260

AT3G10260


Description : Reticulon family protein


Gene families : OG_01_0000350 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G10260
Cluster HCCA: Cluster_32


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005783 endoplasmic reticulum ISS Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
BP GO:0009963 positive regulation of flavonoid biosynthetic process RCA Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
BP GO:0002229 defense response to oomycetes IEP HCCA
BP GO:0002239 response to oomycetes IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP HCCA
MF GO:0004311 farnesyltranstransferase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 cellular amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006576 cellular biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP HCCA
BP GO:0006690 icosanoid metabolic process IEP HCCA
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006805 xenobiotic metabolic process IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007044 cell-substrate junction assembly IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
CC GO:0008305 integrin complex IEP HCCA
BP GO:0008360 regulation of cell shape IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
MF GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009063 cellular amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid family metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009106 lipoate metabolic process IEP HCCA
BP GO:0009108 obsolete coenzyme biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0009695 jasmonic acid biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
MF GO:0009927 histidine phosphotransfer kinase activity IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009978 allene oxide synthase activity IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0010030 positive regulation of seed germination IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
CC GO:0010319 stromule IEP HCCA
BP GO:0010731 protein glutathionylation IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015038 glutathione disulfide oxidoreductase activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016143 S-glycoside metabolic process IEP HCCA
BP GO:0016144 S-glycoside biosynthetic process IEP HCCA
MF GO:0016165 linoleate 13S-lipoxygenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016672 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
BP GO:0017014 protein nitrosylation IEP HCCA
BP GO:0018119 peptidyl-cysteine S-nitrosylation IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018198 peptidyl-cysteine modification IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019369 arachidonic acid metabolic process IEP HCCA
BP GO:0019373 epoxygenase P450 pathway IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019757 glycosinolate metabolic process IEP HCCA
BP GO:0019758 glycosinolate biosynthetic process IEP HCCA
BP GO:0019760 glucosinolate metabolic process IEP HCCA
BP GO:0019761 glucosinolate biosynthetic process IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031407 oxylipin metabolic process IEP HCCA
BP GO:0031408 oxylipin biosynthetic process IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033500 carbohydrate homeostasis IEP HCCA
BP GO:0033559 unsaturated fatty acid metabolic process IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034329 cell junction assembly IEP HCCA
BP GO:0034330 cell junction organization IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
MF GO:0034722 gamma-glutamyl-peptidase activity IEP HCCA
BP GO:0034754 cellular hormone metabolic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042593 glucose homeostasis IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
CC GO:0043235 receptor complex IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044106 cellular amine metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
MF GO:0045174 glutathione dehydrogenase (ascorbate) activity IEP HCCA
BP GO:0046218 indolalkylamine catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
MF GO:0046423 allene-oxide cyclase activity IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046786 viral replication complex formation and maintenance IEP HCCA
BP GO:0046900 tetrahydrofolylpolyglutamate metabolic process IEP HCCA
MF GO:0047251 thiohydroximate beta-D-glucosyltransferase activity IEP HCCA
BP GO:0048041 focal adhesion assembly IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0052482 defense response by cell wall thickening IEP HCCA
BP GO:0052544 defense response by callose deposition in cell wall IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080027 response to herbivore IEP HCCA
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
MF GO:0090353 polygalacturonase inhibitor activity IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0098636 protein complex involved in cell adhesion IEP HCCA
CC GO:0098802 plasma membrane signaling receptor complex IEP HCCA
BP GO:0150115 cell-substrate junction organization IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901659 glycosyl compound biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 62 215
PLAZA 3.0 Dicots AT3G10260