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  5. AT3G10340

AT3G10340


Description : phenylalanine ammonia-lyase 4


Gene families : OG_01_0000505 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G10340
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Mp4g10060.1 No alias phenylalanine ammonia lyase (PAL) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_18830V3.1 No alias PHE ammonia lyase 1 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0010413 glucuronoxylan metabolic process RCA Interproscan
BP GO:0045492 xylan biosynthetic process RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000210 NAD+ diphosphatase activity IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0003988 acetyl-CoA C-acyltransferase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP HCCA
MF GO:0004029 aldehyde dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004300 enoyl-CoA hydratase activity IEP HCCA
MF GO:0004301 epoxide hydrolase activity IEP HCCA
MF GO:0004445 inositol-polyphosphate 5-phosphatase activity IEP HCCA
MF GO:0004506 squalene monooxygenase activity IEP HCCA
MF GO:0004551 nucleotide diphosphatase activity IEP HCCA
MF GO:0004564 beta-fructofuranosidase activity IEP HCCA
MF GO:0004575 sucrose alpha-glucosidase activity IEP HCCA
MF GO:0004594 pantothenate kinase activity IEP HCCA
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP HCCA
MF GO:0004805 trehalose-phosphatase activity IEP HCCA
MF GO:0004829 threonine-tRNA ligase activity IEP HCCA
BP GO:0005513 detection of calcium ion IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005955 calcineurin complex IEP HCCA
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0005987 sucrose catabolic process IEP HCCA
BP GO:0006195 purine nucleotide catabolic process IEP HCCA
BP GO:0006333 chromatin assembly or disassembly IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006435 threonyl-tRNA aminoacylation IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006971 hypotonic response IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009154 purine ribonucleotide catabolic process IEP HCCA
BP GO:0009166 nucleotide catabolic process IEP HCCA
BP GO:0009261 ribonucleotide catabolic process IEP HCCA
BP GO:0009299 mRNA transcription IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009313 oligosaccharide catabolic process IEP HCCA
BP GO:0009413 response to flooding IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009813 flavonoid biosynthetic process IEP HCCA
BP GO:0009819 drought recovery IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010205 photoinhibition IEP HCCA
BP GO:0010254 nectary development IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0010334 sesquiterpene synthase activity IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010417 glucuronoxylan biosynthetic process IEP HCCA
BP GO:0010466 negative regulation of peptidase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010555 response to mannitol IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
MF GO:0010945 CoA pyrophosphatase activity IEP HCCA
BP GO:0010951 negative regulation of endopeptidase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015099 nickel cation transmembrane transporter activity IEP HCCA
BP GO:0015675 nickel cation transport IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016207 4-coumarate-CoA ligase activity IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
MF GO:0016408 C-acyltransferase activity IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016794 diphosphoric monoester hydrolase activity IEP HCCA
MF GO:0016801 hydrolase activity, acting on ether bonds IEP HCCA
MF GO:0016803 ether hydrolase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019605 butyrate metabolic process IEP HCCA
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP HCCA
BP GO:0030007 cellular potassium ion homeostasis IEP HCCA
BP GO:0030162 regulation of proteolysis IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
MF GO:0030744 luteolin O-methyltransferase activity IEP HCCA
MF GO:0030755 quercetin 3-O-methyltransferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0031350 intrinsic component of plastid membrane IEP HCCA
CC GO:0031351 integral component of plastid membrane IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
MF GO:0033799 myricetin 3'-O-methyltransferase activity IEP HCCA
BP GO:0033869 nucleoside bisphosphate catabolic process IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
MF GO:0034002 (R)-limonene synthase activity IEP HCCA
BP GO:0034031 ribonucleoside bisphosphate catabolic process IEP HCCA
BP GO:0034034 purine nucleoside bisphosphate catabolic process IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
MF GO:0034768 (E)-beta-ocimene synthase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042214 terpene metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042539 hypotonic salinity response IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043692 monoterpene metabolic process IEP HCCA
BP GO:0043693 monoterpene biosynthetic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045861 negative regulation of proteolysis IEP HCCA
MF GO:0046030 inositol trisphosphate phosphatase activity IEP HCCA
BP GO:0046246 terpene biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046352 disaccharide catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046459 short-chain fatty acid metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0047209 coniferyl-alcohol glucosyltransferase activity IEP HCCA
MF GO:0047760 butyrate-CoA ligase activity IEP HCCA
MF GO:0047763 caffeate O-methyltransferase activity IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048479 style development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
MF GO:0050550 pinene synthase activity IEP HCCA
MF GO:0050551 myrcene synthase activity IEP HCCA
MF GO:0050552 (4S)-limonene synthase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0051552 flavone metabolic process IEP HCCA
BP GO:0051553 flavone biosynthetic process IEP HCCA
BP GO:0051554 flavonol metabolic process IEP HCCA
BP GO:0051555 flavonol biosynthetic process IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051761 sesquiterpene metabolic process IEP HCCA
BP GO:0051762 sesquiterpene biosynthetic process IEP HCCA
BP GO:0052547 regulation of peptidase activity IEP HCCA
BP GO:0052548 regulation of endopeptidase activity IEP HCCA
MF GO:0052745 inositol phosphate phosphatase activity IEP HCCA
BP GO:0055075 potassium ion homeostasis IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071836 nectar secretion IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072523 purine-containing compound catabolic process IEP HCCA
BP GO:0072708 response to sorbitol IEP HCCA
MF GO:0080015 sabinene synthase activity IEP HCCA
BP GO:0080086 stamen filament development IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity IEP HCCA
MF GO:0090599 alpha-glucosidase activity IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902347 response to strigolactone IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905156 negative regulation of photosynthesis IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
BP GO:2001293 malonyl-CoA metabolic process IEP HCCA
BP GO:2001294 malonyl-CoA catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 54 532
PLAZA 3.0 Dicots AT3G10340