AT3G10525

Description : LOSS OF GIANT CELLS FROM ORGANS

Gene families : OG_01_0011644 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G10525
Cluster	HCCA: Cluster_378

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G04470	No alias	cyclin-dependent protein kinase inhibitors	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006275	regulation of DNA replication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032875	regulation of DNA endoreduplication	None	Extended
BP	GO:0032877	positive regulation of DNA endoreduplication	IMP	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045740	positive regulation of DNA replication	None	Extended
BP	GO:0045787	positive regulation of cell cycle	None	Extended
BP	GO:0048468	cell development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0090068	positive regulation of cell cycle process	None	Extended
BP	GO:0090329	regulation of DNA-dependent DNA replication	None	Extended
BP	GO:0090393	sepal giant cell development	IMP	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:2000105	positive regulation of DNA-dependent DNA replication	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006520	cellular amino acid metabolic process	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006546	glycine catabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006949	syncytium formation	IEP	HCCA
BP	GO:0008156	negative regulation of DNA replication	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009071	serine family amino acid catabolic process	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0009890	negative regulation of biosynthetic process	IEP	HCCA
BP	GO:0010026	trichome differentiation	IEP	HCCA
MF	GO:0010291	carotene beta-ring hydroxylase activity	IEP	HCCA
BP	GO:0010422	regulation of brassinosteroid biosynthetic process	IEP	HCCA
BP	GO:0010423	negative regulation of brassinosteroid biosynthetic process	IEP	HCCA
BP	GO:0010894	negative regulation of steroid biosynthetic process	IEP	HCCA
BP	GO:0010948	negative regulation of cell cycle process	IEP	HCCA
BP	GO:0016119	carotene metabolic process	IEP	HCCA
BP	GO:0016122	xanthophyll metabolic process	IEP	HCCA
BP	GO:0016123	xanthophyll biosynthetic process	IEP	HCCA
BP	GO:0019216	regulation of lipid metabolic process	IEP	HCCA
BP	GO:0019218	regulation of steroid metabolic process	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0030308	negative regulation of cell growth	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032350	regulation of hormone metabolic process	IEP	HCCA
BP	GO:0032351	negative regulation of hormone metabolic process	IEP	HCCA
BP	GO:0032353	negative regulation of hormone biosynthetic process	IEP	HCCA
BP	GO:0032876	negative regulation of DNA endoreduplication	IEP	HCCA
BP	GO:0042214	terpene metabolic process	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0045786	negative regulation of cell cycle	IEP	HCCA
BP	GO:0045833	negative regulation of lipid metabolic process	IEP	HCCA
BP	GO:0045926	negative regulation of growth	IEP	HCCA
BP	GO:0045939	negative regulation of steroid metabolic process	IEP	HCCA
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	HCCA
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	HCCA
MF	GO:0046982	protein heterodimerization activity	IEP	HCCA
BP	GO:0050810	regulation of steroid biosynthetic process	IEP	HCCA
BP	GO:0051055	negative regulation of lipid biosynthetic process	IEP	HCCA
BP	GO:0090030	regulation of steroid hormone biosynthetic process	IEP	HCCA
BP	GO:0090032	negative regulation of steroid hormone biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:2000038	regulation of stomatal complex development	IEP	HCCA
BP	GO:2000104	negative regulation of DNA-dependent DNA replication	IEP	HCCA

No InterPro domains available for this sequence

External Links

PLAZA 3.0 Dicots	AT3G10525

AT3G10525

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation