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  5. AT3G11380

AT3G11380


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0000478 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11380
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G07590 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0004033 aldo-keto reductase (NADP) activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004737 pyruvate decarboxylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0005513 detection of calcium ion IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
CC GO:0009986 cell surface IEP HCCA
MF GO:0010294 abscisic acid glucosyltransferase activity IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015105 arsenite transmembrane transporter activity IEP HCCA
BP GO:0015700 arsenite transport IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043473 pigmentation IEP HCCA
BP GO:0043476 pigment accumulation IEP HCCA
BP GO:0043478 pigment accumulation in response to UV light IEP HCCA
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP HCCA
BP GO:0043480 pigment accumulation in tissues IEP HCCA
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 450 496
IPR002885 Pentatricopeptide_repeat 184 212
IPR002885 Pentatricopeptide_repeat 145 177
PLAZA 3.0 Dicots AT3G11380